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Fundamental constraints to the logic of living systems

Excellent review in which Solé et al. explore how physical/mathematical constraints may determine what subset of biological systems could theoretically evolve in the universe. Lots of fascinating ideas applying concepts like Turing machines, cellular automata, McCulloch-Pitts networks, energy minimization, and phase transitions to multiscale biological and evolutionary phenomena!

I found the description of how parasites almost inevitably emerge and drive increased biodiversity in computational models of evolution particularly fascinating. Interestingly, I recall this idea was featured in the Hyperion Cantos novels during an explanation of the history of artificial intelligence in their fictional universe!


Abstract. It has been argued that the historical nature of evolution makes it a highly path-dependent process. Under this view, the outcome of evolutionary dynamics could have resulted in organisms with different forms and functions. At the same time, there is ample evidence that convergence and constraints strongly limit the domain of the potential design principles that evolution can achieve. Are these limitations relevant in shaping the fabric of the possible? Here, we argue that fundamental constraints are associated with the logic of living matter. We illustrate this idea by considering the thermodynamic properties of living systems, the linear nature of molecular information, the cellular nature of the building blocks of life, multicellularity and development, the threshold nature of computations in cognitive systems and the discrete nature of the architecture of ecosystems. In all these examples, we present available evidence and suggest potential avenues towards a well-defined theoretical formulation.

World’s most advanced supercomputers decode nuclear reactor turbulence

At Argonne National Laboratory, researchers are trading in old-school approximations for raw supercomputing power, proving that the secret to a safer carbon-free future lies in mastering the math of chaos.

Researchers are advancing nuclear safety by using high-performance computing to model turbulent flow — the chaotic movement of fluids and gases that governs heat transfer and gas mixing within a reactor.

DNA origami vaccine rivals mRNA shots while being easier to store and manufacture

The COVID-19 pandemic brought messenger RNA (mRNA) vaccines to the forefront of global health care. After their clinical trial stages, the first COVID-19 mRNA vaccine was administered on 8 December 2020 and mathematical models suggest that mRNA vaccines prevented at least 14.4 million deaths from COVID-19 in the first year alone.

Their extraordinary effectiveness in having softened the blow of the disease has led to the development of mRNA vaccines to also combat other infectious pathogens.

Clinical trials for influenza virus, Respiratory Syncytial Virus (RSV), HIV, Zika, Epstein-Barr virus, and tuberculosis bacteria are all on the way. Importantly, however, COVID-19 research has revealed shortcomings of mRNA vaccines that highlight the need for different approaches.

Engineers Create Unusual Magnetic Material That Behaves Like Graphene

Researchers at the University of Illinois have discovered a surprising mathematical connection between two areas of condensed-matter physics that were long considered separate. The electronic and magnetic behavior of two-dimensional materials both hold significant promise for future technologies.

The Simulation Argument Was Never Actually Debunked — And The Math Is Getting Worse

In 2017, headlines around the world declared the simulation hypothesis dead. Physicists had debunked it, the articles said. We could all move on. There was one problem. The paper they cited never mentioned the simulation hypothesis. The debunking was invented by journalists who never read the research. And in the years since, the actual physics has gotten significantly worse.

This documentary follows that physics all the way down.

We begin with what really happened in 2017 — the Ringel-Kovrizhin paper, what it actually proved, and Scott Aaronson’s correction that nobody shared. Then we examine Nick Bostrom’s original 2003 trilemma, the real math behind it, and why two decades of attacks from Sean Carroll, Lisa Randall, and Sabine Hossenfelder have failed to break it. Every critique concedes something. Every attempted kill shot narrows the escape routes.

From there, we trace the physics of information through three remarkable lives. Konrad Zuse, who built the first programmable computer in his parents’ living room during the bombing of Berlin, then proposed in 1967 that the universe itself is a computation — and was ignored. John Archibald Wheeler, who lost his brother in World War Two and spent the rest of his life asking whether reality is built from information, condensing it into three words that changed physics: \.

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Philip Kitcher — Philosophy of Reductionism & Emergence

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Can biology be explained entirely in terms of chemistry and then physics? If so, that’s “reductionism.” Or are there “emergent” properties at higher levels of the hierarchy of life that cannot be explained by properties at lower or more basic levels?

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Philip Stuart Kitcher is a British philosopher who is the John Dewey Professor Emeritus of philosophy at Columbia University. He specialises in the philosophy of science, the philosophy of biology, the philosophy of mathematics, and more recently pragmatism.

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Closer To Truth, hosted by Robert Lawrence Kuhn and directed by Peter Getzels, presents the world’s greatest thinkers exploring humanity’s deepest questions. Discover fundamental issues of existence. Engage new and diverse ways of thinking. Appreciate intense debates. Share your own opinions. Seek your own answers.

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