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Archive for the ‘genetics’ category: Page 272

Apr 23, 2020

Reversing diabetes with CRISPR and patient-derived stem cells

Posted by in categories: bioengineering, biotech/medical, genetics

Now, scientists at Washington University in St. Louis have developed a way to use gene editing system CRISPR-Cas9 to edit a mutation in human-induced pluripotent stem cells (iPSCs) and then turn them into beta cells. When transplanted into mice, the cells reversed preexisting diabetes in a lasting way, according to results published in the journal Science Translational Medicine.

While the researchers used cells from patients with Wolfram syndrome—a rare childhood diabetes caused by mutations in the WFS1 gene—they argue that the combination of a gene therapy with stem cells could potentially treat other forms of diabetes as well.

Virtual Event

Apr 22, 2020

DNA may not be life’s instruction book—just a jumbled list of ingredients

Posted by in categories: biotech/medical, genetics

The common view of heredity is that all information passed down from one generation to the next is stored in an organism’s DNA. But Antony Jose, associate professor of cell biology and molecular genetics at the University of Maryland, disagrees.

In two new papers, Jose argues that DNA is just the ingredient list, not the set of instructions used to build and maintain a living organism. The instructions, he says, are much more complicated, and they’re stored in the that regulate a cell’s DNA and other functioning systems.

Jose outlined a new theoretical framework for heredity, which was developed through 20 years of research on genetics and epigenetics, in peer-reviewed papers in the Journal of the Royal Society Interface and the journal BioEssays. Both papers were published on April 22, 2020.

Apr 21, 2020

Introduction to Genetic Algorithm and Python Implementation For Function Optimization

Posted by in categories: genetics, information science

Here, in this article, I will try to give you an idea of how a genetic algorithm works and we will implement the genetic algorithm for function optimization. So, let’s start.

Apr 20, 2020

Body part regeneration: How science can make the jump from fantasy to reality

Posted by in categories: biotech/medical, genetics, life extension, science

Salamanders and lizards can regrow limbs. Certain worms and other creatures can generate just about any lost part — including a head — and the latest genetics research on body part regeneration is encouraging.


Since they are adult stem cells that have reverted back to a less developed — more pluripotent — state, iPSCs remind scientists of the stem cells that enable lizards to regrow limbs, and zebrafish to regrow hearts. When it comes to limbs, the understanding the regrowth process could help scientists promote nerve regeneration in cases when a limb is severely damaged, but not physically lost. Nerves of the human peripheral nervous system do have the ability to regrow, but whether this actually happens depends on the extent of the injury, so understanding the stem cell physiology in zebrafish and other animals could help clinicians fill the gap. The knowledge gained also could impact development of treatments aimed at promoting nerve regrowth in the central nervous system, for instance in the spinal cord after an injury.

Continue reading “Body part regeneration: How science can make the jump from fantasy to reality” »

Apr 18, 2020

Genetic tracing ‘barcode’ is rapidly revealing COVID-19’s journey and evolution

Posted by in categories: biotech/medical, genetics

Drexel University researchers have reported a method to quickly identify and label mutated versions of the virus that causes COVID-19. Their preliminary analysis, using information from a global database of genetic information gleaned from coronavirus testing, suggests that there are at least six to 10 slightly different versions of the virus infecting people in America, some of which are either the same as, or have subsequently evolved from, strains directly from Asia, while others are the same as those found in Europe.

First developed as a way of parsing to get a snapshot of the mix of bacteria, the genetic analysis tool teases out patterns from volumes of genetic information and can identify whether a virus has genetically changed. They can then use the pattern to categorize viruses with using tags called Informative Subtype Markers (ISM).

Applying the same method to process viral genetic data can quickly detect and categorize slight genetic variations in the SARS-CoV-2, the novel coronavirus that causes COVID-19, the group reported in a paper recently posted on the preliminary research archive, bioRxiv. The genetic analysis tool that generates these labels is publicly available for COVID-19 researchers on GitHub.

Apr 18, 2020

Controversial ‘gene drive’ could disarm deadly wheat pathogen

Posted by in categories: biotech/medical, food, genetics

Lab tests show potential of gene-spreading strategy to fight plant diseases.

Apr 18, 2020

Possible Dinosaur DNA Has Been Found

Posted by in categories: biotech/medical, genetics

New discoveries have raised the possibility of exploring dino genetics, but controversy surrounds the results.

Apr 18, 2020

Experimental COVID-19 Vaccine Hacks Your DNA to Build Immunity

Posted by in categories: biotech/medical, cybercrime/malcode, genetics

Just like a virus hijacks your cells and forces them to churn out more copies of the virus, this vaccine is expected to automate the production of those particles, which B-cells and T-cells — the biological hunter-seekers of the immune system — can use to ready themselves to fight the real-deal coronavirus.

The main difference between this sort of DNA-based vaccine and a traditional one, Slavcev told Futurism, is that it relies on the person’s cells to create the mock virus instead of merely exposing them to an inert version of the real virus.

“Personal genetics only has to do with how the vaccine is presented,” Slavcev told Futurism, regarding the decision to develop a DNA-based vaccine. “There is some variation between individuals and populations, but in this case the DNA is just to improve immune response and make it mimic a viral infection as closely as possible to stimulate the most effective immune response.”

Apr 17, 2020

Analysis of the mutation dynamics of SARS-CoV-2 reveals the spread history and emergence of RBD mutant with lower ACE2 binding affinity

Posted by in categories: biotech/medical, evolution, genetics

Via Harvard David A. Sinclair “The coronavirus is part bat & part human virus. A new study says the Frankenstein event happened well before its transmission to humans. Wait, what? Humans first infected bats?

The intermediate Frankenstein coronavirus has part human/part bat versions of the spike protein (the knobs on the outside of the virus & what COVID-19 vaccines target). Coronafrankenstein is formally called RaTG13, the name, rank & serial # of a horseshoe bat sample. If we gave bats coronavirus first, then people, including scientists, should stay away from bats especially if they don’t feel well. That’s why, as much as I like cats, I don’t like how they can catch it from us. It’s a potentially vicious cycle.

The new study says a mutation has changed the spike protein of an Indian strain of coronavirus that likely reduces its ability to transmit, but “raises the alarm that the ongoing vaccine development may become futile in future epidemics” like seasonal flu.”


Monitoring the mutation dynamics of SARS-CoV-2 is critical for the development of effective approaches to contain the pathogen. By analyzing 106 SARS-CoV-2 and 39 SARS genome sequences, we provided direct genetic evidence that SARS-CoV-2 has a much lower mutation rate than SARS. Minimum Evolution phylogeny analysis revealed the putative original status of SARS-CoV-2 and the early-stage spread history. The discrepant phylogenies for the spike protein and its receptor binding domain proved a previously reported structural rearrangement prior to the emergence of SARS-CoV-2. Despite that we found the spike glycoprotein of SARS-CoV-2 is particularly more conserved, we identified a mutation that leads to weaker receptor binding capability, which concerns a SARS-CoV-2 sample collected on 27th January 2020 from India. This represents the first report of a significant SARS-CoV-2 mutant, and raises the alarm that the ongoing vaccine development may become futile in future epidemic if more mutations were identified.

Apr 17, 2020

Building Blocks of the Genetic Code

Posted by in categories: biotech/medical, food, genetics, health

Humans and all other living things have DNA, which contains hereditary information. The information in your DNA gives your cells instructions for producing proteins. Proteins drive important body functions, like digesting food, building cells, and moving your muscles.

Your DNA is the most unique and identifying factor about you—it helps determine what color your eyes are, how tall you are, and how likely you are to have certain health problems. Even so, over 99% of DNA sequences are the same among all people. It is the remaining 1% that explains much of what makes you, you!

DNA is arranged like two intertwined ropes, in a structure called a double helix (see figure 1). Each strand of DNA is made of four types of molecules, also called bases, attached to a sugar-phosphate backbone. The four bases are adenine (A), guanine (G), cytosine ©, and thymine (T). The bases pair in a specific way across the two strands of the helix: adenine pairs with thymine, and cytosine pairs with guanine.