Lifeboat Foundation

Proteins are essential to the life of cells, carrying out complex tasks and catalyzing chemical reactions. Scientists and engineers have long sought to harness this power by designing artificial proteins that can perform new tasks, like treat disease, capture carbon, or harvest energy, but many of the processes designed to create such proteins are slow and complex, with a high failure rate.

In a breakthrough that could have implications across the healthcare, agriculture, and energy sectors, a team lead by researchers in the Pritzker School of Molecular Engineering (PME) at the University of Chicago has developed an artificial intelligence-led process that uses big data to design new proteins.

By developing machine-learning models that can review protein information culled from genome databases, the researchers found relatively simple design rules for building artificial proteins. When the team constructed these artificial proteins in the lab, they found that they performed chemistries so well that they rivaled those found in nature.

From chemistry to materials science to COVID-19 research, the APS is one of the most productive X-ray light sources in the world. An upgrade will make it a global leader among the next generation of light sources, opening new frontiers in science.

In the almost 25 years since the Advanced Photon Source (APS), a U.S. Department of Energy (DOE) Office of Science User Facility, first opened at DOE’s Argonne National Laboratory, it has played an essential role in some of the most pivotal discoveries and advancements in science.

Continue reading “Advanced Photon Source upgrade will transform the world of scientific research” »

UC Davis scientists spent years editing a sex-determining gene into bovine embryos using Crispr. In April, Cosmo arrived—and his DNA reveals how far the field has to go.

(Reuters) — Shares of Moderna Inc fell nearly 10% after it lost a bid to invalidate a U.S. patent owned by Arbutus Biopharma that poses a potential obstacle to Moderna’s efforts to develop next-generation vaccines, including a coronavirus vaccine.

Although the coronavirus vaccine is progressing at a breakneck pace, some people feel that it is not progressing fast enough. As such, they have volunteered in the One Day Sooner movement to get deliberately infected with the coronavirus in order to speed up vaccine development.

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The extraordinary progress that has been achieved in the biomedical sciences in the modern era can be attributed in large measure to imaging technologies that have allowed scientists to observe the structure and function of tissues and organs in the context of their natural tissue environments in greater detail than possible with the naked eye.

But that ability has been limited to a handful of traditional animal model systems, including worms, flies and mice, either by tissue characteristics that make them amenable to imaging (such as a lack of natural pigmentation), or by the fact that the techniques used for preparing microscopic specimens in these models are not broadly applicable to a diverse range animal species.

The development of a new imaging technique by Prayag Murawala, Ph.D., of the MDI Biological Laboratory and his collaborators, however, enables unprecedented insight subcellular structures, tissues, organs and even whole organisms, and—because of its wide applicability—broadens the range of animal models that can be studied, processes that can be explored and biological questions that can be addressed.

Scientists have discovered extinct strains of smallpox in the teeth of Viking skeletons — proving for the first time that the killer disease plagued humanity for at least 1400 years.

Smallpox spread from person to person via infectious droplets, killed around a third of sufferers and left another third permanently scarred or blind. Around 300 million people died from it in the 20th century alone before it was officially eradicated in 1980 through a global vaccination effort — the first human disease to be wiped out.

Now an international team of scientists have sequenced the genomes of newly discovered strains of the virus after it was extracted from the teeth of Viking skeletons from sites across northern Europe. The findings have been published in Science today (July 23, 2020).

Cells work around the clock to deliver, maintain, and control every aspect of life. And just as with humans, communication is a key to their success.

Every essential biological process requires some form of communication among cells, not only with their immediate neighbors but also to those significantly farther away. Current understanding is that this information exchange relies on the diffusion of signaling molecules or on cell-to-cell relays.

Publishing in the journal Developmental Cell, a research team at Kyoto University’s Graduate School of Medicine reports on a novel method of communication relying on ‘mechano-chemical’ signals to control cell movement. The research group focused on a fundamental pathway—MAPK/ERK, or ERK pathway—and were able to demonstrate how the movement of a single cell could trigger a cascading reaction resulting in the migration of a cell collective.

When DNA forms, it usually creates the characteristic double-helix that we’ve all come to recognize. However, given the right ingredients, DNA can fold with another pair of strands to create a quadruple-stranded structure that may have some pretty important roles. These structures, called G-quadruplexes (G4), have only been seen in chemistry lab experiments or in some cancer cells, so understanding exactly what their roles are has been difficult, until now.

Scientists have now produced the first visualization of a G-quadruplex formation in live, healthy cells. By developing a fluorescent marker that can bind to G4s, the researchers could track the formation of a quadruplex structure for the first time, with the results published in Nature. This provides confirmation that normal cellular processes produce these structures, and not a process gone haywire like those in cancer.

“For the first time, we have been able to prove the quadruple helix DNA exists in our cells as a stable structure created by normal cellular processes. This forces us to rethink the biology of DNA. It is a new area of fundamental biology, and could open up new avenues in diagnosis and therapy of diseases like cancer,” said one of the lead researchers Dr Marco Di Antonio in a statement.